import sys tabpfn_path = 'TabPFN' sys.path.insert(0, tabpfn_path) # our submodule of the TabPFN repo (at 045c8400203ebd062346970b4f2c0ccda5a40618) from TabPFN.scripts.transformer_prediction_interface import TabPFNClassifier import numpy as np import pandas as pd import torch import gradio as gr import openml def compute(table: np.array): vfunc = np.vectorize(lambda s: len(s)) non_empty_row_mask = (vfunc(table).sum(1) != 0) table = table[non_empty_row_mask] empty_mask = table == '' empty_inds = np.where(empty_mask) if not len(empty_inds[0]): return "**Please leave at least one field blank for prediction.**", None if not np.all(empty_inds[1][0] == empty_inds[1]): return "**Please only leave fields of one column blank for prediction.**", None y_column = empty_inds[1][0] eval_lines = empty_inds[0] train_table = np.delete(table, eval_lines, axis=0) eval_table = table[eval_lines] try: x_train = torch.tensor(np.delete(train_table, y_column, axis=1).astype(np.float32)) x_eval = torch.tensor(np.delete(eval_table, y_column, axis=1).astype(np.float32)) y_train = train_table[:, y_column] except ValueError: return "**Please only add numbers (to the inputs) or leave fields empty.**", None classifier = TabPFNClassifier(base_path=tabpfn_path, device='cpu') classifier.fit(x_train, y_train) y_eval, p_eval = classifier.predict(x_eval, return_winning_probability=True) # print(file, type(file)) out_table = table.copy().astype(str) out_table[eval_lines, y_column] = [f"{y_e} (p={p_e:.2f})" for y_e, p_e in zip(y_eval, p_eval)] return None, out_table def upload_file(file): if file.name.endswith('.arff'): dataset = openml.datasets.OpenMLDataset('t', 'test', data_file=file.name) X_, _, categorical_indicator_, attribute_names_ = dataset.get_data( dataset_format="array" ) df = pd.DataFrame(X_, columns=attribute_names_) return df elif file.name.endswith('.csv') or file.name.endswith('.data'): df = pd.read_csv(file.name, header=None) df.columns = np.arange(len(df.columns)) return df example = \ [ [1, 2, 1], [2, 1, 1], [1, 1, 1], [2, 2, 2], [3, 4, 2], [3, 2, 2], [2, 3, ''] ] with gr.Blocks() as demo: gr.Markdown("""This demo allows you to play with the **TabPFN**. The TabPFN will classify the values for all empty cells in the label column. Please, provide everything but the label column as numeric values. You can also upload datasets to fill the table automatically. """) inp_table = gr.DataFrame(type='numpy', value=example, headers=[''] * 3) upload_file('iris.csv') btn = gr.Button("Predict Empty Table Cells") btn.click(fn=compute, inputs=inp_table, outputs=[out_text, out_table]) out_text = gr.Markdown() out_table = gr.DataFrame() examples = gr.Examples(examples=['iris.csv', 'balance-scale.arff'], inputs=[inp_file], outputs=[inp_table], fn=upload_file, cache_examples=True) inp_file = gr.File( label='Drop either a .csv (without header, only numeric values for all but the labels) or a .arff file.') inp_file.change(fn=upload_file, inputs=inp_file, outputs=inp_table) demo.launch()